Elicit: Total Analytical Error in Liver Fibrosis Panels (public)
For a liver fibrosis panel, what is total analytical error by population (NAFLD, viral hepatitis, alcohol-related)?
Total analytical error was not explicitly reported for liver fibrosis panels in any population (NAFLD, viral hepatitis, alcohol-related), with studies instead using sensitivity, specificity, and AUROC metrics.
Abstract
No study reported an explicit total analytical error for liver fibrosis panels. Instead, papers quantified diagnostic performance using metrics such as sensitivity, specificity, AUROC, and predictive values. In nonalcoholic fatty liver disease (NAFLD), panels based on FIB-4, NAFLD Fibrosis Score, and APRI showed:
- Sensitivity ranging from 7% to 33% in general NAFLD (with negative predictive values of 98–99% when compared to transient elastography)
- In patients with Type 2 Diabetes Mellitus, FIB-4 reached sensitivities of 81.6–95.9% and AUROC values of 0.79–0.91
- In NAFLD/NASH studies incorporating novel markers (e.g., RAB14, PLIN2), sensitivities of 88–100%, specificities of 89.6–100%, and AUROC up to 0.99 were noted
In viral hepatitis, panels including Hepascore, FIB-4, APRI, and FIBROSpect II demonstrated sensitivities between 71.8% and 82%, specificities around 65–74%, and AUROC values of 0.81–0.83. For alcohol-related liver disease, tests such as Enhanced Liver Fibrosis and FibroTest yielded AUROC figures of 0.90–0.92 with negative predictive values of 97–98%, along with false positive rates of 8–45% and false negatives below 8%.
Methods
We analyzed 40 sources from an initial pool of 996, using 8 screening criteria. Each paper was reviewed for 5 key aspects that mattered most to the research question.
Data extraction
We asked a large language model to extract each data column below from each paper.
Study Population and Setting:
- Total number of participants
- Population type (NAFLD, viral hepatitis, alcohol-related liver disease)
- Mean/median age
- Gender distribution
- Specific clinical setting (e.g., liver clinic, primary care, research study)
- Inclusion and exclusion criteria
Liver Fibrosis Assessment Method:
- Primary method of fibrosis assessment (e.g., liver biopsy, transient elastography, non-invasive scoring system)
- Specific measurement techniques (e.g., FibroScan, specific scoring algorithm)
- Cutoff values used to define fibrosis stages
- Reference standard used for validation
Total Analytical Error Measurements:
- Extract quantitative data on:
- Analytical error rates
- Sensitivity
- Specificity
- Positive predictive value
- Negative predictive value
- Area under the receiver operating characteristic (AUROC) curve
Variability and Measurement Precision:
- Extract information on:
- Intra-individual variability of test measurements
- Measurement error sources
- Reproducibility of results
- Factors affecting measurement precision
Study Limitations and Bias Considerations:
- Identify potential sources of bias
- Spectrum effect or spectrum bias discussions
- Limitations in study design
- Generalizability of results
- Conflicts of interest
- Funding sources
Results
Characteristics of Included Studies
| Study | Study Population | Fibrosis Tests Evaluated | Total Analytical Error Calculation Method | Sample Size | Full text retrieved |
|---|---|---|---|---|---|
| Hernaez and Thrift, 2017 | General ambulatory (NAFLD context) | NAFLD fibrosis score, APRI, FIB-4, TE | Sensitivity, specificity; no explicit TAE | 749 | No |
| Ajmera and Loomba, 2023 | NAFLD with Type 2 Diabetes Mellitus | FIB-4, VCTE, Agile 3+/4, MRE | Sensitivity, specificity; no explicit TAE | 501 | No |
| Angelini et al., 2022 | NAFLD/NASH | RAB14, PLIN2, FIB-4, NFS, APRI, 2D-SWE | Sensitivity, specificity; no explicit TAE | 250 | Yes |
| Mózes et al., 2023 | NAFLD | FIB-4, NFS, LSM-VCTE, histology | AUROC; no explicit TAE | 2518 | No |
| Sanyal et al., 2022 | NAFLD | Agile 3+, Agile 4, FIB-4, LSM | AUROC; no explicit TAE | - | No |
Total Analytical Error by Population
| Population | Fibrosis Test | Total Analytical Error | Reference Standard |
|---|---|---|---|
| NAFLD (general) | FIB-4, NFS, APRI | Sensitivity 7–33%, Specificity 87–100%, NPV 98–99% (no explicit TAE) | Transient Elastography |
| NAFLD (Type 2 Diabetes Mellitus) | FIB-4 | Sensitivity 81.6–95.9%, AUROC 0.79–0.91 | Magnetic Resonance Elastography, biopsy |
| NAFLD (NASH) | RAB14, PLIN2, FIB-4, NFS, APRI | Sensitivity 88–100%, Specificity 89.6–100%, AUROC up to 0.99 | Biopsy |
| Alcohol-related | Enhanced Liver Fibrosis, FibroTest | AUROC 0.90–0.92, NPV 97–98% (no explicit TAE) | Biopsy |